Publications
2024
Ivankovic M., Brand J.N., Pandolfini L., Brown T., Pippel M., Rozanski A., Grohme M.A., Winkler S., Schubert T., Robledillo L., Vila-Farré M., Zhang S., Gustincich S., Papantonis A., Marquez A., Rink J.C.
A comparative analysis of planarian genomes indicates regulatory conservation in the face of rapid structural divergence
Nature Communications, vol. 15, (no. 1), pp. 8215
2024
Gözde F., Landuzzi F., Brambilla A., Charrance D., Furia F., Trova S., Peracino A., Camenisch G., Waldvogel D., Howard-McCombe J., Spelorzi Y., Henzen E., Bernagozzi A., Coppe A., Christille J.M., Vecchi M., Vozzi D., Cavalli A., Bassano B., Gustincich S., Croll D., Pandolfini L., Grossen C.
A highly contiguous reference genome for the Alpine ibex (Capra ibex)
bioRxiv
Article
Journal
2024
Mangoni D., Mazzetti A., Ansaloni F., Simi A., Tartaglia G.G., Pandolfini L., Gustincich S., Sanges R.
From the genome’s perspective: bearing somatic retrotransposition to leverage the regulatory potential of L1 RNAs
BioEssays
Review
Journal
2023
D'Agostino S., Tettey M. A., Volpe M., Pierattini B., Ansaloni F., Lau P., Bon C., Peruzzo O., Braccia C., Armirotti A., Scarpato M., Damiani D., Di Carlo V., Carninci P., Santoro C., Persichetti F., Pandolfini L., Espinoza S., Zucchelli S., Sanges R., Gustincich S.
Internal Ribosome Entry Site RNAs act in trans through an antisense sequence in linear and circular non-coding RNAs
bioRxiv
2023
Mangoni D., Simi A., Lau P., Armaos A., Ansaloni F., Codino A., Damiani D., Floreani F., Di Carlo V., Vozzi D., Persichetti F., Santoro C., Pandolfini L., Tartaglia G.G., Sanges R., Gustincich S.
L1 RNAs regulate cortical development by tuning PRC2 activity
EMBL Symposium: Brain genome: regulation, evolution and function
Poster
Conference
2023
Mangoni D., Simi A., Lau P., Armaos A., Ansaloni F., Codino A., Damiani D., Floreani L., Di Carlo V., Vozzi D., Persichetti F., Santoro C., Pandolfini L., Tartaglia G.G., Sanges R., Gustincich S.
LINE-1 regulates cortical development by acting as long non-coding RNAs
Nature Communications, vol. 14, (no. 1)
2023
Pierattini B., D'Agostino S., Bon C., Peruzzo O., Alendar A., Codino A., Ros G., Persichetti F., Sanges R., Carninci P., Santoro C., Espinoza S., Valentini P., Pandolfini L., Gustincich S.
SINEUP non-coding RNA activity depends on specific N6-methyladenosine nucleotides
Molecular Therapy - Nucleic Acids, vol. 32, pp. 402-414
2023
Simi A., Ansaloni F., Damiani D., Codino A., Mangoni D., Lau P., Vozzi D., Pandolfini L., Sanges R., Gustincich S.
The Pgbd5 DNA transposase is required for mouse cerebral cortex development through DNA double-strand breaks formation
bioRxiv
Article
E-print Archive
2022
Mangoni D., Simi A., Lau P., Armaos A., Ansaloni F., Codino A., Damiani D., Floreani L., Di Carlo V., Vozzi D., Persichetti F., Santoro C., Pandolfini L., Tartaglia G.G., Sanges R., Gustincich S.
L1 RNAs regulate cortical development by tuning PRC2 activity
SIBBM 2022 Frontiers in Molecular Biology The RNA World 3.0
Poster
Conference
2022
Dunville K., Tonelli F., Novelli E., Codino A., Massa V., Frontino A.M., Galfrè S., Biondi F., Gustincich S., Caleo M., Pandolfini L., Alia C., Cremisi F.
Laminin511 and WNT signalling sustain prolonged expansion of hiPSC-derived hippocampal progenitors.
Development (Cambridge)
2022
Valentini P., Pierattini B., Zacco E., Mangoni D., Espinoza S., Webster N.A., Andrews B., Carninci P., Tartaglia G.G., Pandolfini L., Gustincich S.
Towards SINEUP-based therapeutics: Design of an in vitro synthesized SINEUP RNA
Molecular Therapy - Nucleic Acids, vol. 27, pp. 1092-1102
2021
Martins M., Galfre S., Terrigno M., Pandolfini L., Appolloni I., Dunville K., Marranci A., Rizzo M., Mercatanti A., Poliseno L., Morandin F., Pietrosanto M., Helmer-Citterich M., Malatesta P., Vignali R., Cremisi F.
A eutherian-specific microRNA controls the translation of Satb2 in a model of cortical differentiation
Stem Cell Reports, vol. 16, (no. 6), pp. 1496-1509
2021
Santos-Rosa H., Millán-Zambrano G., Han N., Leonardi T., Klimontova M., Nasiscionyte S., Pandolfini L., Tzelepis K., Bartke T., Kouzarides T.
Methylation of histone H3 at lysine 37 by Set1 and Set2 prevents spurious DNA replication
Molecular Cell
2021
Luzi E., Pandolfini L., Ciuffi S., Marini F., Cremisi F., Nesi G., Brandi M.L.
MicroRNAs regulatory networks governing the epigenetic landscape of MEN1 gastro-entero-pancreatic neuroendocrine tumor: A case report
Clinical and Translational Medicine, vol. 11, (no. 4)
2021
Leger A., Amaral P.P., Pandolfini L., Capitanchik C., Capraro F., Miano V., Migliori V., Toolan-Kerr P., Sideri T., Enright A.J., Tzelepis K., van Werven F.J., Luscombe N.M., Barbieri I., Ule J., Fitzgerald T., Birney E., Leonardi T., Kouzarides T.
RNA modifications detection by comparative Nanopore direct RNA sequencing
Nature Communications, vol. 12, (no. 1)